Re: [jats-list] Proposal for tagging concepts in JATS

["Debbie Lapeyre dalapeyre@xxxxxxxxxxxxxxxx" <jats-list-service@xxxxxxxxxxxxxxxxxxxxxx>]

Debbie (just back from vacation) loves this solution!

1) <named-content> to name the element content as a bconcept'

2) Then 4 vocabulary attributes to tie it down as
best you want to/can to an external vocabulary.

<named-content> (this is a concept, a gene, a protein
     sequence, a metaphor, or whatever) and
<styled-content> (I want to turn this text all upper case,
    or green, or shadowed, or invisible)
are very handy little work-arounds.

JATS as a vocabulary cannot possibly name all the phrase-level
things users might be interested in (ferrous-material,
ceramic, boiling-point, legal-test) nor can JATS possibly
capture all the emphasis types of all the worldbs
languages.

But <named-content> lets you capture any phrase-level semantics,
and <styled-content> lets you capture most phrase-level stylings.

Thanks all!

bDebbie

> On Feb 1, 2019, at 4:32 PM, Mark Donoghue m.donoghue@xxxxxxxx
<jats-list-service@xxxxxxxxxxxxxxxxxxxxxx> wrote:
>
> Hi Michael,
>
> I added a comment:
> https://github.com/substance/texture/issues/1102#issuecomment-459867141
>
> But to reiterate, @vocab seems to be the way to go.
>
>
https://jats.nlm.nih.gov/articleauthoring/tag-library/1.2d2/attribute/vocab.h
tml
>
> Best,
> Mark
>
> - -- --- ----- -------- -------------
> Mark Donoghue
> IEEE
> (732) 562-6045
> m.donoghue@xxxxxxxx
>
> IEEE - Advancing Technology for Humanity
>
>
> On Fri, Feb 1, 2019 at 2:07 PM Michael Aufreiter michael@xxxxxxxxxxxx
<jats-list-service@xxxxxxxxxxxxxxxxxxxxxx> wrote:
> Hi everybody!
>
> I'm Michael from Substance (http://substance.io) we are building Texture, a
visual JATS editor. We have been discussing the usecase of tagging concepts
(such as gene sequences) in JATS and providing a flexible user interface to
create and edit those.
>
> We currently want to cover the use cases of eLife but are keen to design it
so that it's extensible for all possible vocabularies in the future.
>
> Please see the proposal in the Github issue:
>
> https://github.com/substance/texture/issues/1102
>
> You can add comments on Github or respond here on the mailing list.
>
> Thank you very much for your input on this!
>
> Michael
>
>
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Deborah A Lapeyre              mailto:dalapeyre@xxxxxxxxxxxxxxxx
Mulberry Technologies, Inc.      http://www.mulberrytech.com
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