Re: [jats-list] Proposal for tagging concepts in JATS

["Michael Aufreiter michael@xxxxxxxxxxxx" <jats-list-service@xxxxxxxxxxxxxxxxxxxxxx>]

Thank you Debbie for your feedback. We will move forward this proposal and
share a final spec, before we get to implement it in Texture (supposedly
until end of June).

Thanks again, Michael

On Mon, Feb 4, 2019 at 11:26 PM Debbie Lapeyre dalapeyre@xxxxxxxxxxxxxxxx <
jats-list-service@xxxxxxxxxxxxxxxxxxxxxx> wrote:

> Debbie (just back from vacation) loves this solution!
>
> 1) <named-content> to name the element content as a bconcept'
>
> 2) Then 4 vocabulary attributes to tie it down as
> best you want to/can to an external vocabulary.
>
> <named-content> (this is a concept, a gene, a protein
>      sequence, a metaphor, or whatever) and
> <styled-content> (I want to turn this text all upper case,
>     or green, or shadowed, or invisible)
> are very handy little work-arounds.
>
> JATS as a vocabulary cannot possibly name all the phrase-level
> things users might be interested in (ferrous-material,
> ceramic, boiling-point, legal-test) nor can JATS possibly
> capture all the emphasis types of all the worldbs
> languages.
>
> But <named-content> lets you capture any phrase-level semantics,
> and <styled-content> lets you capture most phrase-level stylings.
>
> Thanks all!
>
> bDebbie
>
> > On Feb 1, 2019, at 4:32 PM, Mark Donoghue m.donoghue@xxxxxxxx <
> jats-list-service@xxxxxxxxxxxxxxxxxxxxxx> wrote:
> >
> > Hi Michael,
> >
> > I added a comment:
> > https://github.com/substance/texture/issues/1102#issuecomment-459867141
> >
> > But to reiterate, @vocab seems to be the way to go.
> >
> >
>
https://jats.nlm.nih.gov/articleauthoring/tag-library/1.2d2/attribute/vocab.h
tml
> >
> > Best,
> > Mark
> >
> > - -- --- ----- -------- -------------
> > Mark Donoghue
> > IEEE
> > (732) 562-6045
> > m.donoghue@xxxxxxxx
> >
> > IEEE - Advancing Technology for Humanity
> >
> >
> > On Fri, Feb 1, 2019 at 2:07 PM Michael Aufreiter michael@xxxxxxxxxxxx <
> jats-list-service@xxxxxxxxxxxxxxxxxxxxxx> wrote:
> > Hi everybody!
> >
> > I'm Michael from Substance (http://substance.io) we are building
> Texture, a visual JATS editor. We have been discussing the usecase of
> tagging concepts (such as gene sequences) in JATS and providing a flexible
> user interface to create and edit those.
> >
> > We currently want to cover the use cases of eLife but are keen to design
> it so that it's extensible for all possible vocabularies in the future.
> >
> > Please see the proposal in the Github issue:
> >
> > https://github.com/substance/texture/issues/1102
> >
> > You can add comments on Github or respond here on the mailing list.
> >
> > Thank you very much for your input on this!
> >
> > Michael
> >
> >
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